BioPerl Modules Installation Options

Q

What are installation options for BioPerl modules?

✍: FYIcenter.com

A

There are several ways to install one or more BioPerl modules.

1. Using "cpanm" command - Run "cpanm ..." to install the given module automatically from cpan.org repository, if have "cpanm" installed. For example, run "cpanm Bio::SeqIO" to install Bio::SeqIO module.

2. Using "cpan" command - Run "cpan install ..." to install the given module automatically from cpan.org repository, if have "cpan" installed. For examples "cpan install Bio::SeqIO" to install Bio::SeqIO module.

3. Using module distribution package - Download the module distribution package from cpan.org repository or other Website. Install it with the "make" tool. You need to install some additional required third-party modules manually too.

4. Using module source code - Download the module source code from github.com/bioperl repository. Install it with the "make" tool. You need to install some additional required third-party modules manually too.

⇒ HOWTO Documents at BioPerl.org

⇐ What Is BioPerl

⇑ BioPerl - Perl Bioinformatics Toolkit

⇑⇑ OBF (Open Bioinformatics Foundation) Tools

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